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e9175bc139
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+17
-13
+17
-13
@@ -26,7 +26,7 @@ function import_files {
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if [[ "$file" =~ ^eidf[a-zA-Z0-9]{2,5}-[a-zA-Z0-9]{3,8}-.+$ ]] && [[ -f "$filepath" ]]; then
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echo "File '$file' is formatted correctly"
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else
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echo "IMPORT FAILED FOR '$file'. Incorrect formatting." | tee -a $TODAY_FAILURES
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echo "IMPORT FAILED FOR '$file'. Incorrect formatting." | tee -a $TODAY_FAILURES
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continue
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fi
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@@ -59,9 +59,10 @@ function import_files {
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;;
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esac
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# Extra Check - If file has been modified in the last 3 minutes, don't move it
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if (( $(date +%s) - $(stat -c %Y "$LANDING_DIR/$file") < (6*3) )); then
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echo "File $file modified in the last 3 minutes. Waiting for upload to complete"
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continue
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echo "File $file modified in the last 3 minutes. Waiting for upload to complete"
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continue
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fi
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echo $project 'directory mounted at' $project_mount
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@@ -70,6 +71,9 @@ function import_files {
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read -r sha256 _ < <(/usr/bin/sha256sum "$filepath")
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printf '%s | %s\n' "$sha256" "$filepath" | tee -a $TODAY_INGRESS
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# Extracts Windows/Linux from $project_mount and sets the 'environment' vairable
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# This changes the moving path depending if window or Linux
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local environment="${project_mount#/mnt/}"
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local environment="${environment%%/*}"
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@@ -78,11 +82,11 @@ function import_files {
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echo "IMPORT FAILED FOR FILE $file - Study could not be identified"
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continue
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else
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echo "$LANDING_DIR/$file $project_mount/Import/$study"
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mv $LANDING_DIR/$file $project_mount/Import/$study
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echo "$LANDING_DIR/$file $project_mount/Import/$study"
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mv $LANDING_DIR/$file $project_mount/Import/$study
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fi
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elif [[ $environment == "linux" ]]; then
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echo "$filepath $project_mount/Import"
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echo "$filepath $project_mount/Import"
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mv "$filepath" $project_mount/Import
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chown root:$project "$project_mount/Import/$file"
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else
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@@ -103,9 +107,9 @@ function export_files {
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local project="${project%%/Export/*}"
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if (( $(date +%s) - $(stat -c %Y $filepath) < (60*3) )); then
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echo "File $file has been modified in the last 3 minutes. Waiting for write to complete"
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continue
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fi
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echo "File $file has been modified in the last 3 minutes. Waiting for write to complete"
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continue
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fi
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echo "$file from $project will be exported"
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@@ -117,7 +121,7 @@ function export_files {
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echo $new_filename
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read -r sha256 _ < <(/usr/bin/sha256sum "$filepath")
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printf '%s | %s\n' "$sha256" "$new_filename" | tee -a $TODAY_EGRESS
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printf '%s | %s\n' "$sha256" "$new_filename" | tee -a $TODAY_EGRESS
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mv "$filepath" "$EXPORT_DIR/$new_filename"
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chgrp $project "$EXPORT_DIR/$new_filename"
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@@ -144,8 +148,8 @@ function export_files {
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if (( $(date +%s) - $(stat -c %Y $filepath) < (60*3) )); then
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echo "File $file has been modified in the last 3 minutes. Waiting for write to complete"
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continue
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fi
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continue
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fi
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echo "$file from $project will be exported"
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@@ -157,7 +161,7 @@ function export_files {
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echo "$file will be renamed $new_filename"
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read -r sha256 _ < <(/usr/bin/sha256sum "$filepath")
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printf '%s | %s\n' "$sha256" "$new_filename" | tee -a $TODAY_EGRESS
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printf '%s | %s\n' "$sha256" "$new_filename" | tee -a $TODAY_EGRESS
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if [[ "$file" == mft-* ]]; then
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mv "$filepath" "/mnt/os-transfer/windows-mft/$project/$study/Export/$new_filename"
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